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openvax / datacache
79%

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DEFAULT BRANCH: master
Repo Added 20 Feb 2018 04:12AM UTC
Files 9
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  • adding-timeout-parameter-and-removing-fasta-helpers
  • fix-17-quote-sql-identifiers
  • fix-40-assert-to-raise
  • fix-45-sqlite-cross-thread
  • fix-49-streaming-download
  • fix-flaky-download-test
  • fix-lint
  • fix-releasing-docs
  • master
  • migrate-pyproject-toml
  • modernize-py3
  • release-1.6.0
  • try-using-wget

18 Jun 2026 08:10PM UTC coverage: 79.043%. Remained the same
27786384221

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Fix stale RELEASING.md: deploy.sh (build+twine), not setup.py sdist upload (#55)

The release steps referenced a deleted setup.py, an obsolete pandoc/pypandoc
readme step, and `python setup.py sdist upload` (deprecated; PyPI rejects it).
Update to the real process: bump datacache/version.py, then ./deploy.sh
(lint + test + build + twine upload).

347 of 439 relevant lines covered (79.04%)

2.37 hits per line

Relevant lines Covered
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Build:
439 RELEVANT LINES 347 COVERED LINES
2.37 HITS PER LINE
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Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
27786384221 master Fix stale RELEASING.md: deploy.sh (build+twine), not setup.py sdist upload (#55) The release steps referenced a deleted setup.py, an obsolete pandoc/pypandoc readme step, and `python setup.py sdist upload` (deprecated; PyPI rejects it). Update to... push 18 Jun 2026 08:10PM UTC web-flow github
79.04
27786378336 master Make test_download.py hermetic; remove dead wget path; harden zip/gz decompress (closes #42) (#56) * Make test_download.py hermetic; remove dead wget download path (closes #42) test_fetch_decompress hit a live Ensembl FTP server and looped over ... push 18 Jun 2026 08:10PM UTC web-flow github
79.04
27786313738 fix-flaky-download-test Bump version to 1.7.0 for release (wget removal + decompress hardening) Pull #56 18 Jun 2026 08:09PM UTC iskandr github
79.04
27785449947 fix-flaky-download-test Decompress atomically (sibling temp + move) so corrupt archives leave no partial Self-review of the prior hardening commit: streaming the zip member / gunzip straight into full_path regressed atomicity. A corrupt or truncated archive (e.g. a gzip... Pull #56 18 Jun 2026 07:53PM UTC iskandr github
79.04
27785451596 fix-flaky-download-test Merge 1133d9c5c into 533db6e7c Pull #56 18 Jun 2026 07:53PM UTC web-flow github pending completion  
27785156915 fix-flaky-download-test Harden zip/gz decompression; add zip test + tighten deprecation test Addressing review of #42: - Stream the chosen zip member straight to the destination via z.open() + copyfileobj, replacing ZipFile.extract() which wrote into the current worki... Pull #56 18 Jun 2026 07:48PM UTC iskandr github
78.55
27784677148 fix-flaky-download-test Make test_download.py hermetic; remove dead wget download path (closes #42) test_fetch_decompress hit a live Ensembl FTP server and looped over use_wget_if_available/timeout while the file was only downloaded once — so the result depended on iter... Pull #56 18 Jun 2026 07:39PM UTC iskandr github
75.57
27784211071 fix-releasing-docs Fix stale RELEASING.md: deploy.sh (build+twine), not setup.py sdist upload The release steps referenced a deleted setup.py, an obsolete pandoc/pypandoc readme step, and `python setup.py sdist upload` (deprecated; PyPI rejects it). Update to the r... Pull #55 18 Jun 2026 07:30PM UTC iskandr github
73.45
27778483053 master Release 1.6.0 + CI: non-fatal Coveralls upload (#54) * CI: make Coveralls upload non-fatal and stop fail-fast cancellation Parallel matrix jobs race to post to the same Coveralls build; the loser gets "build already closed" and (with fail-fast) ... push 18 Jun 2026 05:47PM UTC web-flow github
73.45
27778386847 release-1.6.0 Bump version to 1.6.0 Release bundling fixes for #17, #40, #45 and the new streaming download / progress_callback feature (#49). Claude-Session: https://claude.ai/code/session_011bzfZPTzWnhAMVD7msyMg1 Pull #54 18 Jun 2026 05:45PM UTC iskandr github
73.45
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