jakirkham / dask-distance

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LAST BUILD ON BRANCH pdist_grp_cdist_comps

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• pdist_grp_cdist_comps
• add__atleast_2d
• add__bool_dist
• add__concatenate
• add__pycompat
• add_accumulate
• add_atop_ravel
• add_bool_dist
• add_bool_dist_title
• add_braycurtis
• add_canberra
• add_cdist
• add_chebyshev
• add_cityblock
• add_compat
• add_correlation
• add_cosine
• add_dice
• add_euclidean
• add_hamming
• add_izip
• add_jaccard
• add_kulsinski
• add_mahalanobis
• add_minkowski
• add_pdist
• add_rogerstanimoto
• add_russellrao
• add_seuclidean
• add_sokalmichener
• add_sokalsneath
• add_sqeuclidean
• add_squareform
• add_wminkowski
• add_yule
• adj_cdist_asarray
• adj_hamming
• adj_hamming_sum
• broadcast_uv_wrapper
• ci_run_flake8
• cmp_many_bool_arrays
• comb_bool_cmp
• cond_def_pdist_kwargs
• d_zeros_array_squareform
• dist_more_metrics
• dist_use_kwargs
• dists_doc_more_kwargs
• drop_broadcast_repeat
• drop_cdist_fin_rchk
• drop_dask_ver_chck
• drop_dice_docs_dot
• enforce_1d_bool_arrs
• fix_euclidean_doc
• fix_license_typo
• fix_mahalanobis_doc_typo
• fix_pdist_bug
• fix_pdist_metric_def
• fix_ravel_chks
• fix_seuclidean_equ
• fix_utils_tst_name
• flake8_fixes
• master
• opt_dist_ident
• opt_gen_pdist_diag
• opt_gen_pdist_diag_2
• opt_gen_pdist_diag_recrsv
• opt_pdist_diag
• opt_squareform
• pdist_doc_more_kwargs
• pdist_knwn_shape
• pdist_norm_arr
• pdist_store_mask
• pdist_use_pycompat_range
• ravel_no_concat
• rchk_lst_z_squareform
• ref_broadcast_uv
• ref_math_expr
• rename_uv_mtx
• req_numpy_dask
• req_scipy_tsts
• rfrsh_dim_check
• simp_cdist_apply
• sp_case_ravel
• sty_fix__cdist_apply
• support_1pt_pdist
• temp
• tidy_formulae
• tst_2d_more_shapes
• tst_cdist_shapes
• tst_wrong_lengths
• tsts_w_kw
• tweak_cdist_conv
• tweak_tst_comp
• use_cookiecutter
• use_mathjax_docs
• use_minkowski_dist_mat
• use_rel_imp
• v0.1.0
• v0.2.0
• vendor_indices
• wrap_braycurtis_doc

Build # 547

Build Type

push

travis-ci

Committed by jakirkham

Commit Message

Compute metric for non-redundant pairs in `pdist`

Attempts an optimization with `pdist` where it only computes the user
provided metric between non-pairs only once. Also constructs the result
as flattened to begin with instead of flattening it afterwards. Thus is
able to avoid any unneeded computations or after the fact restructuring
simplifying the code.

Run Details

296 of 298 relevant lines covered (99.33%)

3.95 hits per line