cokelaer / rnaseq
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coverage: 80.072%. Remained the same
32597167990

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cokelaer 
Exclude the test suite from the Codacy analysis

pytest relies on plain assert statements, which the bandit engine reports
(B101) on every single line, hiding the real findings.

221 of 276 relevant lines covered (80.07%)

1.6 hits per line

Relevant lines Covered
276 RELEVANT LINES 221 COVERED LINES
1.6 HITS PER LINE
Source Files on main

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
32597167990 main Exclude the test suite from the Codacy analysis pytest relies on plain assert statements, which the bandit engine reports (B101) on every single line, hiding the real findings. push cokelaer github
80.07
32596712205 main Address static analysis findings in the genome download code - validate the zip members before extraction to prevent path traversal - sort the archive content so that the selected fasta/GFF is deterministic - chain the RuntimeError exceptions wit... push cokelaer github
80.07
32596079512 main Add --genome-accession to download the genome and its annotation from NCBI The genome sequence and its annotation can now be downloaded on the fly given a NCBI assembly accession, into a local directory named after that accession. The NCBI 'datas... push cokelaer github
79.55
32595817984 main Add --genome-accession to download the genome and its annotation from NCBI The genome sequence and its annotation can now be downloaded on the fly given a NCBI assembly accession, into a local directory named after that accession. The NCBI 'datas... push cokelaer github
79.55
28564063808 main Fix metadata push cokelaer github
73.48
26798034342 main Fix metadata push cokelaer github
73.48
25242094071 main Fix metadata push cokelaer github
73.48
24089333833 main Fix metadata push cokelaer github
73.48
24088775663 main update container images push cokelaer github
73.48
24081421128 main Remove pulp version pin no longer needed with snakemake >= 8 Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> push cokelaer github
73.48
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