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broadinstitute / viral-assemble
69%
master: 69%

Build:
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LAST BUILD BRANCH: v2.4.3.1
DEFAULT BRANCH: master
Repo Added 10 Sep 2019 08:19PM UTC
Files 9
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04 Oct 2025 02:25AM UTC coverage: 69.173% (+1.2%) from 68.016%
18238282946

Pull #57

github

dpark01
Fix test_simulate_bed_coverage to use larger regions

Increase BED regions from 1000bp/500bp to 2000bp/3000bp to ensure
regions are large enough for wgsim with default outer_distance=500
(wgsim requires region_len >= outer_distance + read_length = 650bp)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Pull Request #57: Add simulate_illumina_reads command for synthetic read generation

238 of 378 branches covered (62.96%)

Branch coverage included in aggregate %.

1427 of 2029 relevant lines covered (70.33%)

0.7 hits per line

Relevant lines Covered
Build:
Build:
2029 RELEVANT LINES 1427 COVERED LINES
0.7 HITS PER LINE
Source Files on dp-wgsim
  • Tree
  • List 9
  • Changed 1
  • Source Changed 0
  • Coverage Changed 1
Coverage ∆ File Lines Relevant Covered Missed Hits/Line Branch Hits Branch Misses

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
18238282946 dp-wgsim Fix test_simulate_bed_coverage to use larger regions Increase BED regions from 1000bp/500bp to 2000bp/3000bp to ensure regions are large enough for wgsim with default outer_distance=500 (wgsim requires region_len >= outer_distance + read_length =... Pull #57 04 Oct 2025 02:32AM UTC dpark01 github
69.17
18226076066 dp-wgsim Merge pull request #54 from broadinstitute/dp-downsample dependency updates and un-hardcode a skani parameter push 03 Oct 2025 03:15PM UTC web-flow github
68.02
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