• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

NBISweden / AGAT
57%

Build:
DEFAULT BRANCH: master
Repo Added 21 Nov 2019 02:27PM UTC
Files 92
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

LAST BUILD ON BRANCH master
branch: master
CHANGE BRANCH
x
Reset
  • master
  • 0.2.0
  • 110
  • 117
  • 122
  • 135
  • 181
  • 190bisbis
  • 192
  • 193
  • 193bis
  • 195
  • 207
  • 221
  • 225
  • 242
  • 245
  • 246
  • 248
  • 260
  • 290
  • 297
  • 300
  • 315
  • 325
  • 327
  • 329
  • 347
  • 350
  • 352
  • 363
  • 368
  • 383
  • 389
  • 3rdcol
  • 3rdcoldebug
  • 401
  • 411
  • 420
  • 424
  • 426
  • 441_GTF_transcript_id
  • 445
  • 448
  • 456
  • 457
  • 458
  • 471
  • 477
  • 47bis
  • 484
  • 507
  • 512
  • 516
  • 528
  • 550
  • 556
  • 94
  • Juke34-patch-1
  • V1.4.0
  • add_ENA_compliant_script
  • aersoares81-patch-1
  • agat_sp_compare_two_annotations_435
  • agat_sp_fix_features_locations_duplicated
  • agat_sp_manage_functional_annotation
  • augustus
  • badge
  • bar
  • case33
  • cleanL1
  • cleanclone
  • compare_two_annotations
  • config
  • cover
  • cover2
  • coveralls
  • damian
  • dep
  • doc
  • docagain
  • docl3
  • docs
  • edta
  • ena
  • extract
  • fasta
  • feature/fixorf
  • feature/flagstop
  • feature/killlist
  • few
  • filter
  • fix-doc-mispelling
  • fixes
  • gtf
  • id
  • improve
  • improve_embl2gff
  • improve_help
  • intergenic
  • intronless
  • keeplist
  • kira
  • l1standalone
  • main
  • manage_function_436
  • mask
  • merge
  • mfannot
  • mkdocs
  • operator
  • osx_zcat
  • parallel
  • patch-1
  • perl
  • readme
  • readthedocs
  • rendering
  • separate
  • sharedir
  • sort
  • speed
  • speedup
  • speedup_l3
  • splice
  • splitstop
  • stat
  • statistics
  • stop
  • tabix
  • tsv
  • uid
  • update
  • update-readme-doc
  • update_doc
  • utr
  • v.0.9.0
  • v.0.9.2
  • v0.0.2
  • v0.0.3
  • v0.1.0
  • v0.1.1
  • v0.2.0
  • v0.2.1
  • v0.2.2
  • v0.2.2bis
  • v0.2.3
  • v0.3.0
  • v0.4.0
  • v0.5.0
  • v0.5.1
  • v0.6.0
  • v0.6.1
  • v0.6.2
  • v0.8.1
  • v0.9.0
  • v0.9.1
  • v0.9.2
  • v1.0.0
  • v1.1.0
  • v1.2.0
  • v1.3.0
  • v1.3.1
  • v1.3.2
  • v1.3.3
  • v1.4.0
  • v1.4.1
  • v1.4.2
  • v1.5.0
  • v1.5.1
  • v1.6.0
  • version
  • version_display

19 Dec 2025 12:10PM UTC coverage: 57.479% (-17.6%) from 75.07%
20369619448

push

github

Juke34
reactivate progress bar for cpu 0

9830 of 17102 relevant lines covered (57.48%)

132.85 hits per line

Relevant lines Covered
Build:
Build:
17102 RELEVANT LINES 9830 COVERED LINES
132.85 HITS PER LINE
Source Files on master
  • Tree
  • List 90
  • Changed 0
  • Source Changed 0
  • Coverage Changed 0
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
20369619448 master reactivate progress bar for cpu 0 push 19 Dec 2025 12:22PM UTC Juke34 github
57.48
20364489032 master 556 (#575) * fix #556 - avoid glue of empty attribute to the ID in GFF3 parsing * fix #250 url_escaped. Keep escaped characters in in the output * add url_encode_out parameter to decode GFF3 url escaped chraracter (is it useful?) * homogenize us... push 19 Dec 2025 08:54AM UTC web-flow github
75.07
20300581206 master use nproc, skip /local/ (#573) * skip /local/ push 17 Dec 2025 11:21AM UTC web-flow github
75.09
20279205314 master Parallel version of AGAT (#549) * fix #507 - add option raw to print raw data in a dedidcated folder * clean indentation * first draft to parallelizing * add paramas part1 * change threads to cpu * parallel param set * add cpu in help and i... push 16 Dec 2025 07:08PM UTC web-flow github
69.18
17299784148 master Merge 5868498a1 into 318049790 Pull #559 28 Aug 2025 04:18PM UTC web-flow github pending completion  
16591218018 master fix rendering push 29 Jul 2025 09:09AM UTC web-flow github
81.2
16590628134 master fix link and add url img instead of relative for external use push 29 Jul 2025 08:42AM UTC web-flow github
81.2
16444047733 master fix #550 (#551) * use check_level1_position instead of check_gene_position * increment version * improve check level1/level2 position and #fix 550 * add a test for agat_sp_keep_longest_isoform * fix test due to fix #550 push 22 Jul 2025 12:40PM UTC web-flow github
81.2
16045638401 master avoid warning Use of uninitialized value in case ouID created becaus… (#548) * avoid warning Use of uninitialized value in case ouID created because no ID in the original feature * suppress annoying Use of uninitialized value * generalize the... push 03 Jul 2025 08:59AM UTC web-flow github
81.2
13885508785 master update action cache to v3 push 16 Mar 2025 05:20PM UTC web-flow github
81.23
See All Builds (1128)
  • Repo on GitHub
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2025 Coveralls, Inc