FAANG / faang-format-transcriber
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DEFAULT BRANCH: v1.0
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LAST BUILD ON BRANCH v1.0
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lairdm 
Rewrite GFF3 metadata, simple hash based substitution like the base substitution filter

521 of 549 relevant lines covered (94.9%)

4.18 hits per line

Relevant lines Covered
549 RELEVANT LINES 521 COVERED LINES
4.18 HITS PER LINE
Source Files on v1.0
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
47 v1.0 Rewrite GFF3 metadata, simple hash based substitution like the base substitution filter push lairdm travis-ci pending completion  
46 v1.0 Change example to use new chromosome mapping json format push lairdm travis-ci pending completion  
45 v1.0 Add functionality to remapping callback that any non-1 offset of a region triggers a remapping. push lairdm travis-ci pending completion  
44 v1.0 Error in dumping chromosome mappings, reverse mapping wasn't added. push lairdm travis-ci pending completion  
43 v1.0 Change example transcript_id filter from an input_filter to an output_filter push lairdm travis-ci pending completion  
42 v1.0 Chromosome mappings updated so species is at a separate level from ucsc_to_ensembl and ensembl_to_ucsc entries push lairdm travis-ci pending completion  
41 v1.0 Added compression support for the output file. push lairdm travis-ci pending completion  
40 v1.0 Missing output_format option when creating the format transcriber object push lairdm travis-ci pending completion  
39 v1.0 - Add a MeTooDelete callback module that looks backwards if a record has been deleted, and deletes the current record if so - Update the gff3_filter_large example to use MeTooDelete to full clean a GTF/GFF3 record set for large records push lairdm travis-ci pending completion  
38 v1.0 Max length of gxf or fasta record filter push lairdm travis-ci pending completion  
See All Builds (36)