Ensembl / ensembl-variation

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• postreleasefix/83
• (HEAD detached at 49e610e)
• (HEAD detached at 531289c)
• (HEAD detached at ca61a9c)
• (HEAD detached at e7681c3)
• (HEAD detached at f398254)
• add-gencc
• add-mavedb-logging-and-fix-mem
• add/chr_breakpoint_term
• add/fetch-multiple-svs
• add/jvm-check
• add/pangenomes
• add/tandem_repeat
• add_eva_pipeline
• add_missing_attribs_116
• api_doc
• breakend-parsing
• bugfix/ld_vcf_missing_variant
• bugfix/vcf-file-push-error
• cadd_turkey
• cds_fix
• changes_vcf_vcf_config.json
• chcadd
• dbnsfp_academic
• dbnsfp_pipeline_upd
• doc_geno_fix
• eva_5
• eva_7
• eva_imp_csi
• eva_release_6
• feat_qc
• feature/LD_refactor
• feature/at7_sample
• feature/backup_db
• feature/rat_citation
• feature/sv_freq
• feature/transcript-haplotypes
• feature/vcf-backend
• fix-go-dumps
• fix/ClinVar_XML_parsing
• fix/bnd-chr-prefix
• fix/bnd-reg
• fix/chr-sys-breakends
• fix/citations_missing_var
• fix/clinvar_post_processing_115
• fix/errored_rest_test
• fix/haplo_error
• fix/haplo_error_116
• fix/hgvs_refseq_edit_112
• fix/hgvsc_refseq
• fix/hgvsg-multiple-alt-alleles
• fix/hgvsp
• fix/hgvsp_singleletter
• fix/mavedb-data
• fix/phenotypes_cgc
• fix/region-sv
• fix/source-vcf-examples
• fix/trim_sequence
• fix/truncation_elongation_csq
• fix/utils_inv_start_altered
• fix/web-vep-input-format
• fix/web-vep-var-end
• fix_docs
• fix_dup
• fix_hgvsg
• fix_incompatibility
• fix_phenotype_assembly_rgd
• fix_phenotype_pipeline_rgd
• fix_phenotype_warning_106
• fix_pop_url_doc
• fix_release_dump
• fix_start_lost
• fix_sv
• fix_sv_so
• fix_sv_so_2
• fix_typo
• fix_vep_test_randomness
• frameshift_stop_retained
• github-actions-update_cp
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• hotfix/cds_codon
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• improve/plugin-fetch-variants-from-db-cache
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• origin/postreleasefix/95
• patch_114
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• update_meta_coord_for_private
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• update_protein_function_115_connection
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• update_schema
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• update_travis_yml
• updating_g2p_pheno
• updating_hgmd_method
• vc_tweaks
• vcf_corrupt

Build # 817

Build Type

push

travis-ci

Committed by willmclaren

Commit Message

dont care about upper/lower case when doing --check_ref

Run Details

15456 of 19637 relevant lines covered (78.71%)

971.7 hits per line