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Clinical-Genomics / microSALT
76%
master: 32%

Build:
Build:
LAST BUILD BRANCH: feat-pubmlst-util-retry
DEFAULT BRANCH: master
Repo Added 25 Apr 2019 10:43AM UTC
Files 21
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LAST BUILD ON BRANCH rc400
branch: rc400
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  • rc400
  • 149-fix-missing-resistances
  • 149-fix-missing-resistances-BACKUP
  • 174-move-ci-to-gha
  • 174-move-ci-to-gha-BACKUP
  • 180-fix-missing-vim-genes
  • 183-remove-kmer-tackning-col
  • 185-fix-duplicate-resistance-rows
  • HEAD
  • add-pubmlst-utils
  • add_output_prefix
  • added-tests
  • autobatch
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  • deliveryfile_fix
  • feat-pubmlst-util-retry
  • fix-199-incorrect-database-used
  • fix-200-move-instantiation-of-app
  • fix-pubmlst-query-insert
  • fix_MLST_oxford
  • fix_pubMLST_downloads
  • fix_referencer
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  • master
  • new_definitions
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  • noncareful_assembly_default
  • oddOrganism
  • param_file
  • patching_struct
  • pct_reads_fix
  • pytest
  • rc4.1.0
  • rc4.2.0
  • rc410
  • replace-custom-oauth-header
  • resistance-hotfix
  • resistance-scrape
  • revert-189-rc410
  • revert-192-add-pubmlst-utils
  • slurmid_fix
  • tidbits
  • ultrafix
  • v2.8.24
  • v3.1.0

11 Oct 2024 09:07AM UTC coverage: 76.105%. First build
#264

Pull #178

travis-ci

samuell
Use HTML codes for åäö
Pull Request #178: Release candidate 4.0.0

8 of 16 new or added lines in 4 files covered. (50.0%)

1997 of 2624 relevant lines covered (76.11%)

0.76 hits per line

Relevant lines Covered
Build:
Build:
2624 RELEVANT LINES 1997 COVERED LINES
0.76 HITS PER LINE
Source Files on rc400
  • Tree
  • List 14
  • Changed 0
  • Source Changed 0
  • Coverage Changed 0
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
#264 rc400 Use HTML codes for åäö Pull #178 11 Oct 2024 09:11AM UTC samuell travis-ci
76.11
#257 rc400 Fix missing vim genes (#182) * Replace Spades assembler with SKESA * Replace blaVIM test data with output from SKESA * Convert sequence naming in Skesa contigs fasta file into Spades format * Check if reference_length is set before showing it ... Pull #178 20 Sep 2024 03:08PM UTC web-flow travis-ci
76.11
#250 rc400 149 fix missing resistances (#179) * Add more blast hits in resistance test data * Return hits in scraping method and fail test by requiring blaOXA-48 * Fix #149 by making regex specific and not matching multiple genes Pull #178 22 Aug 2024 11:10AM UTC web-flow travis-ci
75.82
#243 rc400 Merge pull request #165 from Clinical-Genomics/noncareful_assembly_default (major) ### Added - Possibility to use the `--isolate` flag ### Changed - Version of SPAdes assembler v3.13.1 -> v3.14.0 - Default assembly mode to `--isolate` ... Pull #178 13 Aug 2024 12:23PM UTC web-flow travis-ci
75.81
#239 rc400 Merge pull request #175 from Clinical-Genomics/174-move-ci-to-gha ### Changed - TravisCI converted to GitHub Actions - The install script uses `micromamba` instead of conda if inside GitHub actions - Some dependency specs were adjusted to ma... Pull #178 31 Jul 2024 08:32AM UTC web-flow travis-ci
81.85
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