Clinical-Genomics
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fix-pubmlst-query-insert
branch: fix-pubmlst-query-insert
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fix-pubmlst-query-insert
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149-fix-missing-resistances
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149-fix-missing-resistances-BACKUP
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174-move-ci-to-gha
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174-move-ci-to-gha-BACKUP
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180-fix-missing-vim-genes
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183-remove-kmer-tackning-col
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185-fix-duplicate-resistance-rows
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HEAD
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add-pubmlst-utils
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add_output_prefix
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added-tests
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autobatch
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coverage
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deliveryfile_fix
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feat-pubmlst-util-retry
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fix-199-incorrect-database-used
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fix-200-move-instantiation-of-app
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fix_MLST_oxford
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fix_pubMLST_downloads
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fix_referencer
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fix_reportfolder
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install_minifix
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installer_upd
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json_fix
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master
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new_definitions
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nodechange
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noncareful_assembly_default
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oddOrganism
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param_file
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patching_struct
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pct_reads_fix
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pytest
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rc4.1.0
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rc4.2.0
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rc400
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rc410
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replace-custom-oauth-header
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resistance-hotfix
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resistance-scrape
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revert-189-rc410
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revert-192-add-pubmlst-utils
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slurmid_fix
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tidbits
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ultrafix
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v2.8.24
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v3.1.0
CHANGE BRANCH
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fix-pubmlst-query-insert
- 149-fix-missing-resistances
- 149-fix-missing-resistances-BACKUP
- 174-move-ci-to-gha
- 174-move-ci-to-gha-BACKUP
- 180-fix-missing-vim-genes
- 183-remove-kmer-tackning-col
- 185-fix-duplicate-resistance-rows
- HEAD
- add-pubmlst-utils
- add_output_prefix
- added-tests
- autobatch
- coverage
- deliveryfile_fix
- feat-pubmlst-util-retry
- fix-199-incorrect-database-used
- fix-200-move-instantiation-of-app
- fix_MLST_oxford
- fix_pubMLST_downloads
- fix_referencer
- fix_reportfolder
- install_minifix
- installer_upd
- json_fix
- master
- new_definitions
- nodechange
- noncareful_assembly_default
- oddOrganism
- param_file
- patching_struct
- pct_reads_fix
- pytest
- rc4.1.0
- rc4.2.0
- rc400
- rc410
- replace-custom-oauth-header
- resistance-hotfix
- resistance-scrape
- revert-189-rc410
- revert-192-add-pubmlst-utils
- slurmid_fix
- tidbits
- ultrafix
- v2.8.24
- v3.1.0
coverage: 31.653% (-0.01%) from 31.663%
travis-ci
2 of 36 new or added lines in 2 files covered. (5.56%)
11 existing lines in 1 file now uncovered.948 of 2995 relevant lines covered (31.65%)
0.32 hits per line
Relevant lines Covered
2995
RELEVANT LINES
948
COVERED LINES
0.32
HITS PER LINE
Source Files on fix-pubmlst-query-insert
Recent builds
| Builds | Branch | Commit | Type | Ran | Committer | Via | Coverage |
|---|---|---|---|---|---|---|---|
| #304 | fix-pubmlst-query-insert | fix trimming and joining | Pull #203 |  karlnyr |
travis-ci |
31.65 |
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| #303 | fix-pubmlst-query-insert | Update profiles CSV output to use tab separation and limit to the first 8 columns | Pull #203 | karlnyr |
travis-ci |
31.68 |
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| #302 | fix-pubmlst-query-insert | Limit profiles CSV output to the first 8 columns to exclude unnecessary information | Pull #203 | karlnyr |
travis-ci |
31.68 |
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| #301 | fix-pubmlst-query-insert | Fix header parsing logic in Profiles and Novel classes to ensure correct column creation | Pull #203 | karlnyr |
travis-ci |
31.71 |
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| #300 | fix-pubmlst-query-insert | Refactor profile and novel table creation to limit header parsing to the first 8 elements | Pull #203 | karlnyr |
travis-ci |
31.71 |