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BioJulia / Bio.jl / 2904
64%

Build:
DEFAULT BRANCH: master
Ran 15 Nov 2016 04:28PM UTC
Jobs 3
Files 119
Run time 170min
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Refactored the branchlength setting and getting API. (#219)

* Refactored the branchlength setting and getting API.

* Created system for getting and setting branchlengths from any kind of metadata, providing three methods are defined for the piece of metadata.

* First draft of branchlength and branchlength! that is extensible to any metadata type.

* Added docstrings

* Added comment lines

* Resolved a phylo testing error

* Corrected add_branch! create_branch! test errors

* Changed some rem_branch! calls to destroy_branch

* Introduces the BranchLength wrapper type and BasicBranch BranchMetaData type

* Moved BranchMetadata to it's own file

* Added convert method for BranchLength wrapper type

* Fixed error in convert method

* Fixed test

* Edited metadata

* BLWrapper

* Removed constructor and wrapper

* Removed parartric nature of basic branch

* Added branchlength method for Float64

* Corrected fault in generated function

* Edited test of branchlength setting

* Corrected error in branchlength setting

* Corrected test

28 of 28 new or added lines in 4 files covered. (100.0%)

8842 of 12810 relevant lines covered (69.02%)

1190592.82 hits per line

Uncovered Changes

Lines Coverage ∆ File
3
100.0
src/phylo/branch_basics.jl
1
100.0
src/phylo/manipulation.jl
Jobs
ID Job ID Ran Files Coverage
1 2904.1 15 Nov 2016 04:36PM UTC 0
83.79
Travis Job 2904.1
2 2904.2 15 Nov 2016 04:28PM UTC 0
68.27
Travis Job 2904.2
4 2904.4 15 Nov 2016 07:19PM UTC 0
68.27
Travis Job 2904.4
Source Files on build 2904
Detailed source file information is not available for this build.
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