openvax / isovar / 40587156166
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Jobs 1
Files 141
Run time 1min
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coverage: 90.802% (-4.1%) from 94.897%
40587156166

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Add reproducible cohort RNA analysis and sequence-rich PDF reports (#594)

* Add reproducible cohort CLI and RNA-supported protein reports

* Keep pending sources out of measured report funnels

* Show single-locus rechecks as compact sequence exemplars

392 of 1035 new or added lines in 9 files covered. (37.87%)

13001 of 14318 relevant lines covered (90.8%)

0.91 hits per line

Uncovered Changes

Lines Coverage ∆ File
558
8.82
isovar/cohort_pdf.py
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77.09
isovar/cohort.py
7
63.16
isovar/cli/isovar_cohort.py
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93.1
isovar/coding_interval_support.py
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95.35
isovar/protein_reference_comparison.py
Jobs
ID Job ID Ran Files Coverage
1 40587156166.1 141
90.8
GitHub Action Run
Source Files on build 40587156166