VariantEffect / mavedb-api / 38806890765
90%

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Jobs 1
Files 384
Run time 1min
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coverage: 90.406% (+1.4%) from 88.962%
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Merge pull request #907 from VariantEffect/release-2026.3.0

Release 2026.3.0

4843 of 5163 new or added lines in 173 files covered. (93.8%)

117 existing lines in 13 files now uncovered.

17319 of 19157 relevant lines covered (90.41%)

0.9 hits per line

Uncovered Changes

Lines Coverage ∆ File
85
72.31
src/mavedb/scripts/backfill_campaign.py
70
70.09
src/mavedb/scripts/audit_reverse_translation.py
23
68.92
src/mavedb/worker/lib/translation_ports.py
13
93.13
-4.68% src/mavedb/routers/score_calibrations.py
13
88.32
56.12% src/mavedb/routers/variants.py
12
90.63
-6.73% src/mavedb/worker/jobs/external_services/vep.py
11
90.09
src/mavedb/lib/vrs_utils.py
7
97.98
-2.02% src/mavedb/lib/score_calibrations.py
7
83.72
-16.28% src/mavedb/lib/variant_translations.py
7
58.14
src/mavedb/scripts/variant_annotations.py
5
28.77
0.72% src/mavedb/scripts/run_pipeline.py
5
51.59
1.32% src/mavedb/scripts/run_score_set_pipelines.py
5
95.73
src/mavedb/worker/lib/projection.py
4
96.69
-3.31% src/mavedb/lib/validation/dataframe/calibration.py
4
84.49
2.04% src/mavedb/routers/score_sets.py
4
88.57
src/mavedb/scripts/audit_scope.py
4
98.03
-1.97% src/mavedb/worker/jobs/external_services/clingen.py
4
98.63
src/mavedb/worker/jobs/variant_processing/reverse_translation.py
3
97.05
-0.69% src/mavedb/worker/jobs/variant_processing/mapping.py
2
90.91
8.56% src/mavedb/data_providers/services.py
2
97.62
src/mavedb/lib/allele_annotations.py
2
96.67
-3.33% src/mavedb/lib/annotation_status_manager.py
2
94.9
2.98% src/mavedb/lib/csv/variant.py
2
94.59
src/mavedb/models/annotation_event.py
2
90.0
src/mavedb/models/enums/sequence_level.py
2
94.87
src/mavedb/models/mapping_record.py
2
68.35
1.87% src/mavedb/routers/collections.py
2
94.44
src/mavedb/view_models/calibration_control.py
2
35.0
-3.89% src/mavedb/worker/settings/lifecycle.py
1
73.91
21.91% src/mavedb/deps.py
1
98.41
src/mavedb/lib/allele_detail.py
1
99.21
src/mavedb/lib/allele_measurements.py
1
98.41
src/mavedb/lib/alleles.py
1
98.55
src/mavedb/lib/annotation/calibration.py
1
98.0
src/mavedb/lib/annotation/context.py
1
91.89
-8.11% src/mavedb/lib/annotation/document.py
1
99.23
src/mavedb/lib/cat_vrs.py
1
97.83
src/mavedb/lib/clinical_controls.py
1
97.85
1.85% src/mavedb/lib/csv/fetch.py
1
99.17
-0.83% src/mavedb/lib/gnomad.py
1
91.67
src/mavedb/models/urn_redirect.py
1
98.0
src/mavedb/routers/alleles.py
1
98.85
-1.15% src/mavedb/worker/jobs/external_services/gnomad.py

Coverage Regressions

Lines Coverage ∆ File
49
84.49
2.04% src/mavedb/routers/score_sets.py
26
77.22
0.29% src/mavedb/lib/score_sets.py
11
28.13
-34.38% src/mavedb/lib/utils.py
8
67.09
-10.13% src/mavedb/lib/target_genes.py
7
86.89
7.76% src/mavedb/lib/clingen/allele_registry.py
5
93.13
-4.68% src/mavedb/routers/score_calibrations.py
3
86.89
-4.92% src/mavedb/lib/slack.py
2
91.89
-8.11% src/mavedb/lib/annotation/document.py
2
35.0
-3.89% src/mavedb/worker/settings/lifecycle.py
1
96.3
-3.7% src/mavedb/models/variant_annotation_status.py
1
68.35
1.87% src/mavedb/routers/collections.py
1
93.59
1.46% src/mavedb/scripts/export_public_data.py
1
98.03
-1.97% src/mavedb/worker/jobs/external_services/clingen.py
Jobs
ID Job ID Ran Files Coverage
1 38806890765.1 384
90.41
GitHub Action Run
Source Files on build 38806890765