33023644177
81%

Ran 26 Aug 2026 11:35PM UTC

Jobs 1

Files 30

Run time 1min

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Committed 26 Aug 2026 11:31PM UTC coverage: 80.858% (+0.006%) from 80.852%

Build # 33023644177

Build Type

push

github

Committed by

web-flow

Commit Message

v1.48.1: fix CEDAR download URL and cross-source IRI dedup (#350, #351) (#370)

#350: FETCHABLE_DATASETS["cedar"] pointed at doc/cedar_mhc_ligand_full.zip,
a filename CEDAR does not serve. Verified live: that URL returns HTTP 200,
text/html, 0 bytes; doc/mhc_ligand_full_single_file.zip on the same host
returns 279,580,312 bytes. Because downloader.php answers 200-with-empty-body
for any unrecognized name instead of 404, the fetch failed identically to a
server outage and the retry loop could not tell the difference.

#351: _drop_duplicate_iris compared raw IRI strings, but IEDB and CEDAR
publish the same assay under different scheme and host
(http://www.iedb.org/assay/N vs https://cedar.iedb.org/assay/N), so shared
assays never collided and were counted twice. Dedup now compares by path;
stripping the origin is a no-op when both sources agree on a host. The
IEDB-wins tie-break and the #236 per-donor split both still hold.

Also fixes a latent bug the above exposes: the `label` parameter was
shadowed by the attributed_sample_label Series, so the "Deduplicated N ..."
line would have printed a whole Series. It never fired, because #351 meant
nothing was ever dropped.

Closes #350, closes #351

Claude-Session: https://claude.ai/code/session_014cBpazLoFvftLSLavT7T9X

Coverage Stats

6053 of 7486 relevant lines covered (80.86%)

0.81 hits per line

Coverage Regressions

Lines	Coverage	∆	File
134	76.32	0.06%	builder.py
81	73.56	0.0%	downloads.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	33023644177.1	26 Aug 2026 11:35PM UTC	30	80.86	GitHub Action Run

pirl-unc / hitlist / 33023644177
81%

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