30093122728
60%

Ran 24 Jul 2026 12:30PM UTC

Jobs 1

Files 31

Run time 1min

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Committed 24 Jul 2026 12:27PM UTC coverage: 60.183% (+3.8%) from 56.368%

Build # 30093122728

Build Type

push

github

Committed by

web-flow

Commit Message

OOP implementation for NWB files (#89)

* Add SpikeInterface/NWB OOP feature calculators

SpikeInterfaceFeatureCalculator: the SpikeInterface BaseRecording contract twin of SpikeGlxLikeFeatureCalculator (uV->V read, LF-latency + end-frame clamp, geometry with electrode-property fallback and a multi-shank guard, durations, metadata).
NwbFeatureCalculator computes features from NWB ElectricalSeries via   NwbRecordingExtractor; acquisition (HDF5/Zarr x local/S3/DANDI) is handled by  composition (NwbSource) with per-backend stream_mode.
Adds FeatureComputationOptions.channel_labels to override bad-channel resolution; adds pynwb/hdmf-zarr/remfile/fsspec/aiohttp/dandi to the [full] extra (lazy-imported,  lite install unaffected). Includes contract-layer + NwbSource-resolution unit tests  and a network-gated IBL-vs-DANDI parity test, plus a DANDI example

* SI-native Zarr calculator

Add SpikeInterfaceZarrFeatureCalculator for SI-native Zarr recordings. Uses  read_zarr recordings from spikeinterface

* Make dartsort n_jobs configurable via feature_params.waveforms

Expose the dartsort worker mode as WaveformParams.n_jobs

* Updated examples for full runs

Uncomment the lines which do the full runs

Coverage Stats

1841 of 3059 relevant lines covered (60.18%)

0.6 hits per line

Coverage Regressions

Lines	Coverage	∆	File
56	82.45	4.51%	features.py
15	90.48	4.91%	feature_calculators/base.py
11	52.38	0.13%	feature_computation.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	30093122728.1	24 Jul 2026 12:30PM UTC	31	60.18	GitHub Action Run

int-brain-lab / ibleatools / 30093122728
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int-brain-lab / ibleatools / 30093122728 60%

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