27370785972
77%

Ran 11 Jun 2026 07:06PM UTC

Jobs 1

Files 38

Run time 1min

Badge

Embed ▾

Committed 11 Jun 2026 07:04PM UTC coverage: 73.793%. Remained the same

Build # 27370785972

Build Type

push

github

Committed by

web-flow

Commit Message

Docs: refresh index + curation to current code/data (counts, schema, naming) (#121)

The docs had drifted from the code. Fixes:
- Stale 'Perseus'/'pirlygenes' naming -> tsarina; fix broken docs/curation.md
  links and the executable import examples.
- Counts -> current actuals: 382-gene universe, 272 expressed, 297 filtered,
  29 never_expressed.
- Three-axis tier system rewritten to the real schema: restriction /
  restriction_confidence / ms_restriction (old evidence/ms_safety columns and
  OVARIAN/RNA_ONLY values were removed); fold in the #114 confidence cap and
  UNCLASSIFIED_MS. Fix the column reference + axis-aware API (dead
  EVIDENCE_VALUES/MS_SAFETY_VALUES).
- Document placental onco-germline antigens (#111), GAGE10 paralog + GAGE12B
  fragment exclusion (#108); drop the stale CGB8 non-CTA exclusion.
- Add 'Identical-protein groups (proteoforms)' section (proteoform-groups.csv +
  the CTA-exclusivity filter).
- Move Figures below Overview for logical flow.

Version: 1.15.1 -> 1.15.2.

Coverage Stats

2720 of 3686 relevant lines covered (73.79%)

0.74 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	27370785972.1	11 Jun 2026 07:06PM UTC	38	73.79	GitHub Action Run

pirl-unc / tsarina / 27370785972
77%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 27370785972

pirl-unc / tsarina / 27370785972 77%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 27370785972

pirl-unc / tsarina / 27370785972
77%

README BADGES
x