27346267848
77%

Ran 11 Jun 2026 12:21PM UTC

Jobs 1

Files 38

Run time 1min

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Committed 11 Jun 2026 12:19PM UTC coverage: 73.793% (+0.04%) from 73.757%

Build # 27346267848

Build Type

push

github

Committed by

web-flow

Commit Message

Cap restriction_confidence at MODERATE for sub-floor RNA-only genes (closes #114) (#116)

synthesize_restriction credited any STRICT RNA equally regardless of level,
so a gene expressed at ~1-2 nTPM (never_expressed, no protein, no MS) earned
HIGH confidence from near-noise RNA. Cap such genes at MODERATE: a restriction
call resting solely on sub-floor RNA is genuinely less trustworthy.

Genes with protein or MS evidence are untouched -- an MS peptide hit means
real expression despite low RNA, so its HIGH is earned. 18 genes flip
HIGH->MODERATE (all RNA-only, 1.0-1.9 nTPM); 146 HIGH remain.

Version: 1.14.1 -> 1.15.0.

Coverage Stats

2720 of 3686 relevant lines covered (73.79%)

0.74 hits per line

Coverage Regressions

Lines	Coverage	∆	File
33	77.74	0.39%	tiers.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	27346267848.1	11 Jun 2026 12:21PM UTC	38	73.79	GitHub Action Run

pirl-unc / tsarina / 27346267848
77%

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pirl-unc / tsarina / 27346267848 77%

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Textile

RDoc

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Coverage Regressions

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Source Files on build 27346267848

pirl-unc / tsarina / 27346267848
77%

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