axondeepseg / axondeepseg / 26704878497

79%

Build Type

push

github

Committed by web-flow

Commit Message

feat(napari): segmentation progress bar + cancel button (#983)

* feat(napari): add progress bar in Activity dock during segmentation

Monkey-patches nnUNet's tqdm reference to emit Qt signals that update a
napari.utils.progress bar in the main thread via a dedicated slot, avoiding
cross-thread QObject calls. Auto-opens the Activity dock when inference
starts so the user sees progress without having to locate it manually.

* Move imports together and rename _nnunet_module for clarity

* Rename some progress bar strings

* Close napari activity dock after successful segmentation

* Put progress bar in ADSplugin menu instead of activity dock

* feat(napari): add cancel button to interrupt segmentation

* Horizontal layout for progress bar and cancel button

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Co-authored-by: Armand Collin <83031821+hermancollin@users.noreply.github.com>
Co-authored-by: Armand Collin <armac@videotron.ca>

Coverage Stats

39 of 66 new or added lines in 1 file covered. (59.09%)

2 existing lines in 1 file now uncovered.

1929 of 2431 relevant lines covered (79.35%)

2.23 hits per line