axondeepseg / axondeepseg / 25389640169

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github

Update conda environment creation to include pip (#978)

* Add --allow-large-images flag to handle images exceeding PIL pixel limit (#974)

* feat - Add pixel size field to model cards and display it in --list

* Update SEM pixel sizes and drop average from display

* Add --allow-large-images flag to handle images exceeding PIL pixel limit

* Fix large image handling in GUI and macOS subprocess workers

- Add confirmation popup in napari when image exceeds PIL pixel limit
- Set ADS_ALLOW_LARGE_IMAGES env var so macOS spawned subprocesses inherit the raised limit
- Guard against @logger.catch swallowing IOError and cascading into a second crash
- Document --allow-large-images flag in CLI reference

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Co-authored-by: Mathieu Boudreau, PhD <emb6150@gmail.com>
Co-authored-by: Armand Collin <83031821+hermancollin@users.noreply.github.com>

* Update conda environment creation to include pip

Added pip installation to conda environment creation.

* Fix coveralls

* Try alternative URL for coveralls darwin binaries

* Try old coveralls python method

* Remove coveralls report push on macintel

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Co-authored-by: Youssef Laatar <laatarjo@gmail.com>
Co-authored-by: Armand Collin <83031821+hermancollin@users.noreply.github.com>

50 of 63 new or added lines in 4 files covered. (79.37%)

1887 of 2366 relevant lines covered (79.75%)

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