25015426653
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Ran 27 Apr 2026 07:37PM UTC

Jobs 1

Files 23

Run time 1min

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Committed 27 Apr 2026 07:35PM UTC coverage: 61.318% (+0.09%) from 61.23%

Build # 25015426653

Build Type

push

github

Committed by

web-flow

Commit Message

v1.24.0: Thread allele-bag filters through generate_training_table (#136) (#164)

#137 added mhc_allele_in_bag / mhc_allele_provenance filters to
generate_observations_table and generate_binding_table, but the unified
training export silently dropped them — MIL-style filters
(provenance=["exact", "sample_allele_match"]) only worked on the two
underlying functions, not on the training table that joins them.

- generate_training_table: accept mhc_allele_in_bag / mhc_allele_provenance
  and route them through shared_kwargs so both wrapped functions filter
  consistently.
- CLI: add --mhc-allele-in-bag / --mhc-allele-provenance flags to
  ``hitlist export training``; thread through _export_training.
- Test: end-to-end pass-through covering both filters across ms+binding.
- Update test_export_training_cli_helper for the two new captured kwargs.

Coverage Stats

2633 of 4294 relevant lines covered (61.32%)

0.61 hits per line

Coverage Regressions

Lines	Coverage	∆	File
71	17.11	-0.08%	cli.py
18	81.57	0.89%	export.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	25015426653.1	27 Apr 2026 07:37PM UTC	23	61.32	GitHub Action Run

pirl-unc / hitlist / 25015426653
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