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cruft: update

Regenerate Wiswa-managed files. Bump ruff pre-commit hook to v0.15.12,
raise ty dev dep to >=0.0.31, drop numpydoc and docutils<0.22 from docs
deps (and numpydoc from the dictionary), remove the Node engines
constraint, walk the cspell devDependency range back to ^9.8.0, simplify
yapfignore patterns, refresh CITATION release date, and refresh
lockfiles.

Signed-off-by: Andrew Udvare <audvare@gmail.com>

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