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fix(web): surface runtime state in Tools modal and MCP Servers settings (#1626)

fix(web): surface runtime state in Tools modal and MCP Servers settings

Tools modal now shows a per-skill runtime indicator (active / server-off / server-missing / skill-disabled / unknown-while-loading) for mcp_server-backed skills, so users can tell when a "checked" skill is not actually injected into the current session.

MCP Servers settings links each app_mcp_servers row to its skill wrapper; orphan rows (e.g. fetch-mcp) render an amber warning that toggling them has no runtime effect.

Runtime-state and linkage logic live in ToolsModal.utils.ts, unit-tested independently. Colour mapping extracted into getMcpSkillRuntimeClasses() with documented semantics. SkillsStore gains an explicit loaded signal (distinct from skills.length > 0) to correctly distinguish the in-flight state from a zero-skills steady state.

Addresses Task #114.

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