• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

pirl-unc / tsarina / 24607455020
74%

Build:
DEFAULT BRANCH: main
Ran 18 Apr 2026 03:07PM UTC
Jobs 1
Files 30
Run time 1min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

18 Apr 2026 03:06PM UTC coverage: 34.808% (+0.02%) from 34.788%
24607455020

push

github

web-flow
v0.7.0: --include-binding-assays actually works (closes #4) (#10)

hitlist 1.10.0 shipped load_all_evidence() — union of observations +
binding parquet with an evidence_kind column.  Wiring tsarina's cached
path through it so --include-binding-assays stops being a warn-and-noop
and actually returns binding rows.

Changes:

- cli_hits.py: when --include-binding-assays is set on the cached path,
  call load_all_evidence(gene_name=, mhc_class=, species=); otherwise
  stay on load_observations().  The old "warn and drop" branch is gone.
- cli_hits.py: --help text for --include-binding-assays updated to
  describe the union + evidence_kind behavior.  No more "no-op"
  language.
- pyproject.toml: hitlist pin >=1.9.0 → >=1.10.0 (required for
  load_all_evidence).
- version.py: 0.6.2 → 0.7.0 (minor bump; user-visible behavior change
  for a flag that was previously silently wrong).

Tests:

- test_hits_help_describes_include_binding_assays_union (replaces the
  old no-op help-text assertion).
- test_include_binding_assays_routes_to_load_all_evidence — when the
  flag is set, load_all_evidence is called, load_observations isn't.
- test_default_cached_path_uses_load_observations_not_union —
  regression guard for the without-flag path.

146 passing (was 148 — old warning test + old help-text test replaced
by two new routing tests; net same coverage on this flag).

Closes #4.

606 of 1741 relevant lines covered (34.81%)

0.35 hits per line

Coverage Regressions

Lines Coverage ∆ File
54
39.0
0.19% cli_hits.py
Jobs
ID Job ID Ran Files Coverage
1 24607455020.1 18 Apr 2026 03:07PM UTC 30
34.81
GitHub Action Run
Source Files on build 24607455020
  • Tree
  • List 30
  • Changed 1
  • Source Changed 0
  • Coverage Changed 1
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
  • Back to Repo
  • Github Actions Build #24607455020
  • 736896be on github
  • Prev Build on main (#24606979891)
  • Next Build on main (#24680859041)
  • Delete
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2026 Coveralls, Inc