24487339199
80%

Ran 16 Apr 2026 01:39AM UTC

Jobs 1

Files 19

Run time 1min

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Committed 16 Apr 2026 01:37AM UTC coverage: 43.234%. Remained the same

Build # 24487339199

Build Type

push

github

Committed by

web-flow

Commit Message

v1.8.2: Split Category 2 pooled multi-donor samples into per-donor entries (#55)

Split 17 pooled ms_samples entries (4 PMIDs) into 76 per-donor/per-cell-line
entries with correct individual HLA genotypes:

- PMID 33858848 (Marcu 2021 HLA Ligand Atlas): 6 pooled → 42 per-donor
  entries (14 autopsy + 5 thymus + 2 ovary donors, class I + II each).
  Per-donor HLA from hla-ligand-atlas.org/rel/2020.12/donors.tsv.gz.

- PMID 35580925 (Khazan-Kost 2022 pleural effusion): 2 pooled → 14
  per-patient entries. Fixed wrong patient grouping (cancer: P2,P3,P4,P6,
  P10-P14; non-malignant: P1,P5,P7,P8,P9 — NOT sequential).
  Per-patient HLA from Table 1.

- PMID 32157095 (Chong 2020 proteogenomics): 3 pooled → 11 per-sample
  entries (7 melanoma cell lines + 2 lung tumor + 2 matched normal).
  Fixed HLA-B*44:02 cross-contamination from lung into melanoma pool.
  Per-sample HLA from Supplementary Data 1.

- PMID 33592498 (Bassani-Sternberg 2021 GBM CIITA): 3 pooled → 9
  per-cell-line entries (HROG02, HROG17, RA × 3 conditions).
  Per-cell-line HLA already documented in hla_alleles section.

Coverage Stats

1195 of 2764 relevant lines covered (43.23%)

0.43 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	24487339199.1	16 Apr 2026 01:39AM UTC	19	43.23	GitHub Action Run

pirl-unc / hitlist / 24487339199
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