23984591722
31%

Ran 04 Apr 2026 06:08PM UTC

Jobs 1

Files 26

Run time 1min

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Committed 04 Apr 2026 06:08PM UTC coverage: 30.197% (+0.02%) from 30.173%

Build # 23984591722

Build Type

push

github

Committed by

web-flow

Commit Message

Fix curation audit issues: filter gating, PMID passthrough, stale exports (#2)

Fixes from tasks/curation_tissue_logic_report.md audit:

- #1: Pass pmid and mhc_restriction to hitlist classify_ms_row in
  tsarina/iedb.py scan_public_ms() and profile_dataset()
- #4: Gate axis helpers (CTA_testis_restricted_gene_names, CTA_by_axes)
  on filtered=True by default, with filtered_only=False opt-out
- #5: Update README to say "predominantly reproductive-restricted"
  instead of overstating restriction purity
- #6: Remove stale CTA_ovarian_restricted_* from __all__, update
  evidence.py docstrings to match shipped column values

Coverage Stats

475 of 1573 relevant lines covered (30.2%)

0.3 hits per line

Coverage Regressions

Lines	Coverage	∆	File
22	23.9	-1.27%	iedb.py
2	96.3	0.19%	gene_sets.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	23984591722.1	04 Apr 2026 06:08PM UTC	26	30.2	GitHub Action Run

pirl-unc / tsarina / 23984591722
31%

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Coverage Regressions

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Source Files on build 23984591722

pirl-unc / tsarina / 23984591722 31%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Coverage Regressions

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Source Files on build 23984591722

pirl-unc / tsarina / 23984591722
31%

README BADGES
x