23756268430
80%

Ran 30 Mar 2026 04:42PM UTC

Jobs 1

Files 11

Run time 1min

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Committed 30 Mar 2026 04:41PM UTC coverage: 31.535% (+0.3%) from 31.22%

Build # 23756268430

Build Type

push

github

Committed by

iskandr

Commit Message

Three-level conditional PMID override system with paper titles

PMID overrides now support three levels of specificity:
1. Conditional rules (rules: list, checked in order, first match wins)
   Each rule has condition: {field: value(s)} and override: value
2. PMID-level default (override: value, applies when no rule matches)
3. No match — falls through to structured-field classification

This handles mixed studies like:
- Neidert: blood=healthy, colon/kidney=adjacent (conditional rules)
- 36589698: ex vivo=healthy, cell lines→cancer (conditional + fallthrough)

Also added:
- Paper titles for all 13 curated studies
- Support note for submission_id-based lookups (studies without PMIDs)
- _matches_condition() helper for flexible field matching

36 tests passing.

Coverage Stats

263 of 834 relevant lines covered (31.53%)

0.32 hits per line

Coverage Regressions

Lines	Coverage	∆	File
13	84.88	-6.78%	curation.py

Jobs

ID	Job ID	Ran	Files	Coverage
1	23756268430.1	30 Mar 2026 04:42PM UTC	11	31.53	GitHub Action Run

pirl-unc / hitlist / 23756268430
80%

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Textile

RDoc

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Source Files on build 23756268430

pirl-unc / hitlist / 23756268430
80%

README BADGES
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