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Clinical-Genomics / cg / 21829606338
86%

Build:
DEFAULT BRANCH: master
Ran 09 Feb 2026 02:48PM UTC
Jobs 1
Files 885
Run time 1min
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09 Feb 2026 02:45PM UTC coverage: 86.44% (+4.7%) from 81.722%
21829606338

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Fetch bed version using ref genome (#4875)(patch)

## Description

### Changed

- Made the filter function in the readhandler that gets the bed version using a short name, also filters with genome version. 
- This new function is used at the start of MIP, RareDisease and Balsamic. And in the Loqusdb upload of Balsamic. 

---------

Co-authored-by: Sebastian Diaz <juan.sebastian.diaz.boada@scilifelab.se>
Co-authored-by: Isak Ohlsson Ångnell <40887124+islean@users.noreply.github.com>
Co-authored-by: islean <isak.ohlsson.angnell@gmail.com>
Co-authored-by: Rasmus Burge <80392398+RasmusBurge-CG@users.noreply.github.com>

22 of 30 new or added lines in 8 files covered. (73.33%)

28208 of 32633 relevant lines covered (86.44%)

0.86 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
92.97
-1.39% cg/meta/observations/balsamic_observations_api.py
3
83.01
-0.2% cg/meta/workflow/analysis.py
3
70.34
-0.49% cg/meta/workflow/mip.py
Jobs
ID Job ID Ran Files Coverage
1 21829606338.1 09 Feb 2026 02:48PM UTC 885
86.44
GitHub Action Run
Source Files on build 21829606338
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  • List 885
  • Changed 8
  • Source Changed 0
  • Coverage Changed 8
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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