Clinical-Genomics / cg / 21032473226

86%

Build Type

push

github

Committed by web-flow

Commit Message

Implement yield based sequencing qc for Nallo (#4821)(minor)

## Description
Closes https://github.com/Clinical-Genomics/production-automation/issues/11
Add sequeincing QC criteria using yield for Nallo

### Added

- Function `case_pass_sequencing_qc_on_hifi_yield` to be used for Nallo cases
- Functions to evaluate sequencing qc on yield for express samples.

### Changed

- Renamed function using reads to include the suffix `on_reads`
- Implemented some functionality as properties in the Store models instead of utils methods
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Co-authored-by: Rasmus Burge <80392398+RasmusBurge-CG@users.noreply.github.com>
Co-authored-by: Linnéa Löfdahl <linnea.lofdahl@scilifelab.se>
Co-authored-by: Sebastian Diaz <juan.sebastian.diaz.boada@scilifelab.se>

Run Details

62 of 71 new or added lines in 5 files covered. (87.32%)

1 existing line in 1 file now uncovered.

28221 of 32789 relevant lines covered (86.07%)

0.86 hits per line