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GavinHuttley / cogent3 / 11312163016
92%
develop: 92%

Build:
Build:
LAST BUILD BRANCH: alignment-refactor
DEFAULT BRANCH: develop
Ran 13 Oct 2024 06:44AM UTC
Jobs 12
Files 174
Run time 1min
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11 Oct 2024 12:13AM UTC coverage: 92.037% (-0.001%) from 92.038%
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Merge pull request #2039 from KatherineCaley/alignment-refactor

API: remove strand arg, modify offset handling for Alignments

9 of 11 new or added lines in 1 file covered. (81.82%)

512 existing lines in 18 files now uncovered.

33715 of 36632 relevant lines covered (92.04%)

11.04 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
94.5
-1.27% src/cogent3/core/new_alignment.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
99.24
0.01% src/cogent3/app/__init__.py
1
98.86
0.1% src/cogent3/app/typing.py
1
97.31
1.0% src/cogent3/__init__.py
1
96.0
1.13% src/cogent3/app/translate.py
3
93.56
0.12% src/cogent3/app/composable.py
5
96.43
0.75% src/cogent3/core/annotation.py
7
97.02
-0.06% src/cogent3/app/align.py
12
94.53
-0.24% src/cogent3/util/dict_array.py
15
89.91
0.67% src/cogent3/parse/fasta.py
20
95.42
-0.07% src/cogent3/evolve/fast_distance.py
22
94.31
7.69% src/cogent3/parse/genbank.py
31
56.64
-3.19% src/cogent3/util/parallel.py
40
95.94
0.14% src/cogent3/core/location.py
41
91.04
0.0% src/cogent3/core/new_moltype.py
44
94.63
-0.07% src/cogent3/core/sequence.py
58
81.28
-0.12% src/cogent3/draw/dendrogram.py
83
94.5
-1.27% src/cogent3/core/new_alignment.py
127
87.55
0.02% src/cogent3/core/new_sequence.py
Jobs
ID Job ID Ran Files Coverage
1 run-3.12-ubuntu-latest - 11312163016.1 13 Oct 2024 06:47AM UTC 174
91.99
GitHub Action Run
2 run-3.12-windows-latest - 11312163016.2 13 Oct 2024 06:48AM UTC 174
92.0
GitHub Action Run
3 run-3.9-macos-latest - 11312163016.3 13 Oct 2024 06:48AM UTC 174
91.95
GitHub Action Run
4 run-3.11-windows-latest - 11312163016.4 13 Oct 2024 06:48AM UTC 174
92.0
GitHub Action Run
5 run-3.9-windows-latest - 11312163016.5 13 Oct 2024 06:47AM UTC 174
91.96
GitHub Action Run
6 run-3.9-ubuntu-latest - 11312163016.6 13 Oct 2024 06:46AM UTC 174
91.95
GitHub Action Run
7 run-3.11-ubuntu-latest - 11312163016.7 13 Oct 2024 06:46AM UTC 174
91.99
GitHub Action Run
8 run-3.10-windows-latest - 11312163016.8 13 Oct 2024 06:47AM UTC 174
91.99
GitHub Action Run
9 run-3.11-macos-latest - 11312163016.9 13 Oct 2024 06:48AM UTC 174
91.99
GitHub Action Run
10 run-3.12-macos-latest - 11312163016.10 13 Oct 2024 06:48AM UTC 174
91.99
GitHub Action Run
11 run-3.10-ubuntu-latest - 11312163016.11 13 Oct 2024 06:46AM UTC 174
91.98
GitHub Action Run
12 run-3.10-macos-latest - 11312163016.12 13 Oct 2024 06:44AM UTC 174
91.99
GitHub Action Run
Source Files on build 11312163016
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  • List 174
  • Changed 134
  • Source Changed 29
  • Coverage Changed 134
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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