3356
92%
master: 94%

Ran 05 Mar 2021 09:54PM UTC

Jobs 1

Files 23

Run time 4s

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Build # 3356

Build Type

push

travis-ci-com

Committed by

web-flow

Commit Message

Batch the FlowSOM process (#399)

* Batch preprocessing step

* Adjust notebook to handle new preprocessing

* Add implementation with multiple fovs batched in run_trained_som.R

* Remove old cluster batching code

* Batch segmentation label loading

* Change segmentation labels loading to numpy

* Remove old commented code, change create_fov_pixel_mat to return matrices and create_pixel_matrix to save matrices

Run Details

1333 of 1370 relevant lines covered (97.3%)

0.97 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	3356.1 (MPLBACKEND=Agg)	05 Mar 2021 09:54PM UTC	0	97.3	Travis Job 3356.1

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