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vinisalazar / BioProv / 84
88%

Build:
DEFAULT BRANCH: master
Ran 20 Oct 2020 07:36PM UTC
Jobs 3
Files 23
Run time 20s
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Merge v0.1.10 (#15)

* Encapsulate BioProvDocument constructor actions into functions.

* Bump version number

* Add serializer_filter options to remove keys from serializer out

* Reformatting with Black after update

* Fixing Program.found error by adding another check to Program._getoutput()

* Adding envs on Project JSON reader

* Creating instance of EnvProv on Project JSON reader

* Added error handling for SeqFile loading

* Improve pretty printing of commands

* Improve Env constructor in Project deserializer

* Update CHANGELOG

* Bump version number

* Clearing notebook state

* Refactoring hashes with hashlib.
    - Added utils.dict_to_sha1() function
    - Removed EnvProv.env_set attribute
    - Refactored tests

* Remove unused import

* Add file_to_sha1() function

* Add sha1 attribute to File class

* Improve EnvProv JSON deserializer

* Refactor tests. Testing BioProvDocument with add_attributes=True

* Update CHANGELOG

* Improve pretty printing of commands.

* Improve default parameters of bioprov.programs.prodigal PresetProgram

* Update introduction tutorial

* Add serializer_filter method to File class

* Improve EnvProv namespace constructor

* Update introduction tutorial

* Update changelog

63 of 63 new or added lines in 23 files covered. (100.0%)

1381 of 1560 relevant lines covered (88.53%)

2.66 hits per line

Jobs
ID Job ID Ran Files Coverage
1 84.1 20 Oct 2020 07:36PM UTC 0
88.53
Travis Job 84.1
2 84.2 20 Oct 2020 07:36PM UTC 0
88.53
Travis Job 84.2
3 84.3 20 Oct 2020 07:37PM UTC 0
88.74
Travis Job 84.3
Source Files on build 84
Detailed source file information is not available for this build.
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