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vanvalenlab / deepcell-tf / 2142
78%
master: 86%

Build:
Build:
LAST BUILD BRANCH: 0.12.10
DEFAULT BRANCH: master
Ran 19 Oct 2020 08:31PM UTC
Jobs 4
Files 52
Run time 4min
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Update RetinaNet models for TensorFlow 2.2+ compatibility (#438)

* don't install tensorflow_addons (yet) and keep tf < 2.3.0

* try to test 2.3.0, hopefully can resolve this before migration.

* supporting 2.1.1+, no more py3 tags.

* no boxes_input if inclue_masks is False

* simplify shape/type dictionary instantiation

* fix mask flexibility for 3D RetinaNet

* remove deprecated "median" norm method.

* only add masks if required

* semantic heads start with the keyword

* always create semantic outputs, but it is empty if not panoptic

* watershed without passing `bins` has 1 output channel.

* add the generator output type/shape for semantic heads

* simplify `temp_boxes` and use `K.ones` instead of `tf.ones`.

* use `deepcell_toolbox.retinamask_semantic_postprocess` in notebook.

* rerun all notebooks with TF 2.3

* `pytest` 6.x does not play well with `pytest-pep8`

* new expected size due to removal of final detection layer and remove TODO comment.

* Add Python 3.6 to supported versions and upgrade TensorFlow to patched versions

* supporting TensorFlow 2.2.1+

5091 of 6990 relevant lines covered (72.83%)

2.9 hits per line

Jobs
ID Job ID Ran Files Coverage
1 2142.1 (TF_VERSION=2.2.1) 19 Oct 2020 08:33PM UTC 0
72.82
Travis Job 2142.1
2 2142.2 (TF_VERSION=2.3.1) 19 Oct 2020 08:31PM UTC 0
72.29
Travis Job 2142.2
3 2142.3 (TF_VERSION=2.2.1) 19 Oct 2020 08:32PM UTC 0
72.82
Travis Job 2142.3
4 2142.4 (TF_VERSION=2.3.1) 19 Oct 2020 08:32PM UTC 0
72.29
Travis Job 2142.4
Source Files on build 2142
Detailed source file information is not available for this build.
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