1361
94%

Ran 29 Aug 2020 02:06AM UTC

Jobs 1

Files 15

Run time 2s

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Build # 1361

Build Type

push

travis-ci-com

Committed by

web-flow

Commit Message

Update distance matrix to xarray type (#200)

* Fix randomization error in synthetic spatial gen and begin updating type of distance matrix to xarray

* Update notebooks and spatial_analysis_utils functions to handle xarray data type for distance matrices

* Forgot to change spatial analysis script outside of Docker

* Further integration

* Fix closenum tests

* Address minor changes (aka other than dict passing)

* Fix centroid labelling with prop.label, which makes life hella easier

* Change Erin's data and adjust accordingly

* Pycodestyle and xarray import crap

* Last fixes

* Update expression matrix, calc_dist_matrix, and notebook to reflect string-only fov indexing

* Forgot to add new segmentation labels

* Change list to .values for indexing purposes

* Break up logic and update comments

* Fix summing error in closenum random

* Remove old data files

Run Details

830 of 933 relevant lines covered (88.96%)

0.89 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	1361.1 (MPLBACKEND=Agg)	29 Aug 2020 02:06AM UTC	0	88.96	Travis Job 1361.1

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