Clinical-Genomics / trailblazer / 688

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Allow scout loading of STR VCFs (#57)

* change parse_config and parse_sampleinfo methods to work with MIP7.1

* feature(mip7.1): allow scout loading of STR VCFs

* rename family_qc_sample_info.yaml to case_qc_sample_info.yaml, anonimize path and names

*  rename family_config.yaml to case_config.yaml, anonimize paths and names

* rename family_qc_metrics.yaml to case_qc_metrics.yaml, anonimize paths and names

* Rename family_config.yaml to case_config.yaml

* Rename family_qc_metrics.yaml to case_qc_metrics.yaml

* Rename family_qc_sample_info.yaml to case_qc_sample_info.yaml

* Rename mip.pl_2017-06-17T12:11:42.log to mip_2019-07-04T10:47:15.log

* Rename mip.pl_2017-06-17T12:11:42.log.status to mip_2019-07-04T10:47:15.log.status

19 of 19 new or added lines in 3 files covered. (100.0%)

501 of 843 relevant lines covered (59.43%)

0.59 hits per line