neuropoly / spinalcordtoolbox / 10636
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DEFAULT BRANCH: master
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Jobs 2
Files 86
Run time 7min
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jcohenadad 
Fixed bug and clarified usage of -centerline viewer (#2183)

* sct_deepseg_sc: modif in usage for -centerline file

* sct_deepseg_lesion: modif in usage for -centerline file

* deepseg_sc: fix syntax bug for -centerline file

* deepseg_lesion: fix syntax bug for -centerline file

* deepseg_sc: output _labels-centerline when -centerline viewer

* deepseg_lesion: output _labels-centerline when -centerline viewer

* deepseg_sc: display temporary folder

* deepseg_lesion: display temporary folder

* deepseg_sc: output centerline when verbose 2

* deepseg_lesion: output centerline when verbose 2

* Fix I-S shift when -centerline viewer (#2189)

* deepseg_sc.crop: output the z coordinates

* deepseg.crop: compatibility

* deepseg_sc.uncrop: reconstruct the segmentation from the z where starts the centerline

* test_deepseg_sc.uncrop: compatibility

* deepseg_lesion.uncrop: compatibility

* deepseg_sc.core: resolve conflict

* deepseg_sc.core: resolve conflits bis

* sct_deepseg_sc: modif in usage for -centerline file

* sct_deepseg_lesion: modif in usage for -centerline file

* deepseg_sc: fix syntax bug for -centerline file

* deepseg_lesion: fix syntax bug for -centerline file

* deepseg_sc: output _labels-centerline when -centerline viewer

* deepseg_lesion: output _labels-centerline when -centerline viewer

* deepseg_sc: display temporary folder

* deepseg_lesion: display temporary folder

* deepseg_sc: output centerline when verbose 2

* deepseg_lesion: output centerline when verbose 2

9883 of 14670 relevant lines covered (67.37%)

1.35 hits per line

Jobs
ID Job ID Ran Files Coverage
1 10636.1 (SCT_MINICONDA=2 MPLBACKEND=Agg) 86
67.37
 Travis Job 10636.1
2 10636.2 (SCT_MINICONDA=2 MPLBACKEND=Agg) 86
67.38
 Travis Job 10636.2
Source Files on build 10636