10069
67%

Ran 22 Nov 2018 10:08PM UTC

Jobs 2

Files 77

Run time 6min

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Build # 10069

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

Enable to set smoothing parameters in all axes (#2073)

* sct_smooth_spinalcord: Accepting float and anisotropic smoothing

Fixes #2072 (unfinished)

* sct_maths: Clarified docstring

* sct_smooth_spinalcord: Removed system call

Replaced with sct_maths.main()
Also, set default smoothing to 0,0,3

* sct_smooth_spinalcord: Output straighten locally

Straightening transfo are now output in the local folder (as opposed to temp folder), so that caching of straightening procedure can be effective, i.e., if user re-run this function with the same image, it will NOT re-do straightning, saving time.

* sct_smooth_spinalcord: Cleanup

* sct_smooth_spinalcord: Fixed straightening path

* Update scripts/sct_smooth_spinalcord.py

Co-Authored-By: jcohenadad <jcohen@polymtl.ca>

* sct_smooth_spinalcord.py: Clarified code with variable

Co-Authored-By: jcohenadad <jcohen@polymtl.ca>

Run Details

10169 of 15567 relevant lines covered (65.32%)

1.31 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	10069.1 (SCT_MINICONDA=2 MPLBACKEND=Agg)	22 Nov 2018 10:08PM UTC	0	65.32	Travis Job 10069.1
2	10069.2 (SCT_MINICONDA=2 MPLBACKEND=Agg)	22 Nov 2018 10:15PM UTC	0	65.33	Travis Job 10069.2

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