1122
89%

Ran 13 Aug 2018 06:29PM CUT

Jobs 1

Files 82

Run time 17s

Badge

Embed ▾

pending completion

Build # 1122

Build Type

push

travis-ci

Committed by

arostamianfar

Commit Message

Add clarification that for multi-allelic sites, you will get extra rows for the genotype 0 (#325)

In the query with the LEFT JOIN on the alternate bases, when filtering by a_index it should filter correctly for nonzero alleles, but it will create extra rows for genotype 0 for multi-allelic sites (where there's multiple alternate bases).

Run Details

5297 of 5894 relevant lines covered (89.87%)

0.9 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	1122.1	13 Aug 2018 06:29PM CUT	82	89.87	Travis Job 1122.1

Source Files on build 1122

Coverage	File	Lines	Relevant	Covered	Missed	Hits/Line
0.0	gcp_variant_transforms/vcf_to_bq_preprocess.py	131	40	0	40	0.0
0.0	gcp_variant_transforms/bq_to_vcf.py	76	25	0	25	0.0
27.21	...nsforms/testing/integration/run_vcf_to_bq_tests.py	302	147	40	107	1.0
27.85	...orms/testing/integration/run_preprocessor_tests.py	175	79	22	57	1.0
32.18	...transforms/testing/integration/run_tests_common.py	215	87	28	59	1.0
36.29	gcp_variant_transforms/vcf_to_bq.py	286	124	45	79	1.0
57.3	...riant_transforms/transforms/variant_to_bigquery.py	243	89	51	38	1.0
72.88	gcp_variant_transforms/vcf_to_bq_common.py	137	59	43	16	1.0
75.0	...forms/libs/variant_merge/variant_merge_strategy.py	62	12	9	3	1.0
75.63	...nt_transforms/options/variant_transform_options.py	446	119	90	29	1.0

89.87
gcp_variant_transforms/

googlegenomics / gcp-variant-transforms / 1122
89%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 1122

googlegenomics / gcp-variant-transforms / 1122 89%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Jobs

Source Files on build 1122

googlegenomics / gcp-variant-transforms / 1122
89%

README BADGES
x