PrincetonUniversity / PsyNeuLink / 699

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Fix/run/input specification (#844)

* using external_input_values and external_input_states to parse input specifications and assign them to SystemInputStates (rather than default variable)

* first round of adjusting error messages, documentation, method names, etc, to reflect the change from default variable as the shape which all inputs should be compared against --> external_input_values

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