539
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master: 100%

Ran 08 Oct 2017 08:04AM UTC

Jobs 4

Files 5

Run time 40s

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Build # 539

Build Type

push

travis-ci

Committed by

jakirkham

Commit Message

Vectorize away for-loop in pdist internal

Eliminate the `for`-loop and condition checking with `pdist`'s wrapper
function. Instead make use of boolean arrays and `nonzero` to extract
the relevant indices to compute over. Also make use of NumPy's
`apply_along_axis` to replace the `for`-loop with a vectorized NumPy
operation. Speeds up computation a bit for the diagonal blocks where
many of pairs of coordinates do not need the metric computed.

Run Details

324 of 324 relevant lines covered (100.0%)

3.98 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	539.1 (PYVER="3.6")	08 Oct 2017 08:04AM UTC	100.0	Travis Job 539.1
2	539.2 (PYVER="3.5")	08 Oct 2017 08:04AM UTC	100.0	Travis Job 539.2
3	539.3 (PYVER="3.4")	08 Oct 2017 08:05AM UTC	100.0	Travis Job 539.3
4	539.4 (PYVER="2.7")	08 Oct 2017 08:05AM UTC	97.53	Travis Job 539.4

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