bigdatagenomics / adam / 2314
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 140
Run time 2min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
2314

Pull #1620

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/fc21bd38237f187ec26ffd1820ce51c87d38477b">fc21bd382<a href="https://github.com/bigdatagenomics/adam/commit/fc21bd38237f187ec26ffd1820ce51c87d38477b">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/fbfd059e771f890ac01a350fb004b25fca1e001a">fbfd059e7</a>">fbfd059e7</a><a href="https://github.com/bigdatagenomics/adam/commit/fc21bd38237f187ec26ffd1820ce51c87d38477b"> into 96fc37f17">96fc37f17</a>
Pull Request #1620: add hive style partitioning for contigName

37 of 37 new or added lines in 1 file covered. (100.0%)

6207 of 7435 relevant lines covered (83.48%)

6.63 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
94.51
 0.71% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
81.77
 0.28% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
97.75
 2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
92.23
 3.88% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
61.73
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
93.33
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
2
62.74
 1.42% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
75.93
 3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
96.92
 -3.08% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
50.0
 -50.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/SAMInFormatter.scala
4
91.84
 0.17% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
4
92.73
 0.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
7
89.06
 0.17% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
11
88.74
 0.08% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
12
85.54
 0.18% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
20
75.0
 0.27% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
38
94.51
 0.71% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
63
82.6
 0.14% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
97
68.82
 -2.51% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2314.1 140
82.92
2 2314.2 140
82.92
3 2314.3 140
82.9
4 2314.4 140
82.9
5 2314.5 140
82.91
6 2314.6 140
82.92
7 2314.7 140
82.92
8 2314.8 140
82.91
Source Files on build 2314
Coverage ∆ File Lines Relevant Covered Missed Hits/Line