bigdatagenomics / adam / 2283
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2283

Pull #1637

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/657655444e6656ff86c9a7dfda2b1570ab4ae7c0">657655444<a href="https://github.com/bigdatagenomics/adam/commit/657655444e6656ff86c9a7dfda2b1570ab4ae7c0">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/4f25158d84792483f73649f933036c46450c9b5a">4f25158d8</a>">4f25158d8</a><a href="https://github.com/bigdatagenomics/adam/commit/657655444e6656ff86c9a7dfda2b1570ab4ae7c0"> into 7449b14ca">7449b14ca</a>
Pull Request #1637: added ExtractRegions

17 of 17 new or added lines in 1 file covered. (100.0%)

6190 of 7374 relevant lines covered (83.94%)

6.69 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
76.85
 2.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
96.88
 -3.13% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/smithwaterman/SmithWaterman.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
94.19
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
89.81
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
85.32
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
84.13
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
81.91
 -0.14% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
82.07
 -0.56% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
4
94.47
 -0.54% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
4
66.23
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
20
76.85
 2.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2283.1 138
83.58
2 2283.2 138
83.59
3 2283.3 138
83.58
4 2283.4 138
83.59
5 2283.5 138
83.6
6 2283.6 138
83.62
7 2283.7 138
83.6
8 2283.8 138
83.62
Source Files on build 2283
Coverage ∆ File Lines Relevant Covered Missed Hits/Line