bigdatagenomics / adam / 2230
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2230

Pull #1598

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://git"><a class=hub.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://git"><a class=hub.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c">c24fe77ef<a href="https://github.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c">&quot;&gt;&amp;lt;a href=&amp;quot;https://github.com/bigdatagenomics/adam/commit/&lt;/a&gt;&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/bigdatagenomics/adam/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://git&quot;&gt;&amp;lt;a class=&lt;/a&gt;hub.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c&quot;&gt;c24fe77ef&lt;/a&gt;&lt;a href=&quot;https://github.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c&quot;&gt;&amp;lt;a href=&amp;quot;https://github.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c8&lt;/a&gt;93402e9c">&quot;&gt;Merge &lt;/a&gt;&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/bigdatagenomics/adam/commit/&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/751da130e533e5f34882ec75ce9a40e7dbaafab3">751da130e</a><a href="https://github.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c">&amp;quot;&amp;gt;751da130e&amp;lt;/a&amp;gt;&amp;quot;&amp;gt;751da130e&amp;lt;/a&amp;gt;&amp;lt;a href=&amp;quot;https://github.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402&lt;/a&gt;e9c&quot;&gt; into &lt;/a&gt;&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/406d1e39b">406d1e39b">406d1e39b</a>
Pull Request #1598: [ADAM-1576] Allow translation between two different GenomicRDD types.

194 of 194 new or added lines in 2 files covered. (100.0%)

6006 of 7101 relevant lines covered (84.58%)

6.72 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
9
92.8
 2.64% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
77.78
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
97.75
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
94.27
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.81
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
61.73
 1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
66.23
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
84.13
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
2
60.91
 -0.51% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
82.05
 -0.28% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
65.38
 -3.85% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
3
90.29
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
92.8
 2.64% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2230.1 138
84.03
2 2230.2 138
84.01
3 2230.3 138
84.01
4 2230.4 138
84.03
5 2230.5 138
84.02
6 2230.6 138
84.02
7 2230.7 138
84.0
8 2230.8 138
84.0
Source Files on build 2230
Coverage ∆ File Lines Relevant Covered Missed Hits/Line