2832

Ran 17 Jul 2017 02:06PM UTC

Jobs 8

Files 138

Run time 1min

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Build # 2832

Build Type

push

jenkins

Committed by

heuermh

Commit Message

[ADAM-1554] Support saving BGZF VCF output.

Resolves #1554. Additionally:

* Moves VCF file extension logic into ADAM, since Hadoop-BAM does not recognize
  .bgzf as a valid BGZF extension
* Refactored VCF output formats to remove need for ADAMHeaderlessVCFOutputFormat

Run Details

5821 of 6914 relevant lines covered (84.19%)

6.69 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	2832.1	17 Jul 2017 02:06PM UTC	138	83.74
2	2832.2	17 Jul 2017 02:06PM UTC	138	83.73
3	2832.3	17 Jul 2017 02:07PM UTC	138	83.74
4	2832.4	17 Jul 2017 02:07PM UTC	138	83.64
5	2832.5	17 Jul 2017 02:07PM UTC	138	83.73
6	2832.6	17 Jul 2017 02:07PM UTC	138	83.64
7	2832.7	17 Jul 2017 02:07PM UTC	138	83.63
8	2832.8	17 Jul 2017 02:07PM UTC	138	83.63

Source Files on build 2832

Coverage	∆	File	Lines	Relevant	Covered	Missed	Hits/Line

bigdatagenomics / adam / 2832

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