bigdatagenomics / adam / 2227
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 2min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
2227

Pull #1598

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c">c24fe77ef<a href="https://github.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/751da130e533e5f34882ec75ce9a40e7dbaafab3">751da130e</a>">751da130e</a><a href="https://github.com/bigdatagenomics/adam/commit/c24fe77ef226e0041a2f34d4212526c893402e9c"> into 406d1e39b">406d1e39b</a>
Pull Request #1598: [ADAM-1576] Allow translation between two different GenomicRDD types.

194 of 194 new or added lines in 2 files covered. (100.0%)

6006 of 7101 relevant lines covered (84.58%)

7.23 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
9
92.8
 2.64% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
77.78
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
97.75
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
94.27
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.81
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
61.73
 1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
66.23
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
84.13
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
2
60.91
 -0.51% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
82.05
 -0.28% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
65.38
 -3.85% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
3
90.29
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
92.8
 2.64% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2227.1 138
84.03
2 2227.2 138
84.03
3 2227.3 138
84.01
4 2227.4 138
84.01
5 2227.5 209
82.85
6 2227.6 138
84.02
7 2227.7 138
84.0
8 2227.8 138
84.0
Source Files on build 2227
Coverage ∆ File Lines Relevant Covered Missed Hits/Line