bigdatagenomics / adam / 2201
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2201

Pull #1397

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/2dc8a3d50eccc5880faae12c13a1c916d03242a3">2dc8a3d50<a href="https://github.com/bigdatagenomics/adam/commit/2dc8a3d50eccc5880faae12c13a1c916d03242a3">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/004b1de83d089cde5e1af36c5d24db4fa1d5376e">004b1de83</a>">004b1de83</a><a href="https://github.com/bigdatagenomics/adam/commit/2dc8a3d50eccc5880faae12c13a1c916d03242a3"> into 324ae74d3">324ae74d3</a>
Pull Request #1397: [ADAM-882] R API

5706 of 6833 relevant lines covered (83.51%)

6.68 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
96.92
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.17
 -0.64% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
93.33
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
94.37
 -1.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
77.78
 -5.56% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
98.87
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala
2
63.64
 -6.06% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
2
81.63
 -0.28% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
84.4
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
80.55
 -0.68% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
2
96.23
 -3.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
2
88.52
 -3.28% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
3
70.37
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
4
59.39
 -0.51% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
4
86.41
 -2.91% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
5
59.74
 -5.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
9
89.45
 -2.06% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2201.1 138
83.51
1 2201.1 138
83.49
2 2201.2 138
83.51
3 2201.3 138
83.49
4 2201.4 138
83.49
5 2201.5 138
83.49
6 2201.6 138
83.51
7 2201.7 138
83.51
Source Files on build 2201
Coverage ∆ File Lines Relevant Covered Missed Hits/Line