bigdatagenomics / adam / 2200
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 5
Files 152
Run time 1min
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2200

Pull #1397

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/a3d3df0deb02ca04174f8a42fc583c416f1caf86">a3d3df0de<a href="https://github.com/bigdatagenomics/adam/commit/a3d3df0deb02ca04174f8a42fc583c416f1caf86">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/dea5fa0bff9dfa75abc49066f08ec94ab8938730">dea5fa0bf</a>">dea5fa0bf</a><a href="https://github.com/bigdatagenomics/adam/commit/a3d3df0deb02ca04174f8a42fc583c416f1caf86"> into 0306717cb">0306717cb</a>
Pull Request #1397: [ADAM-882] R API

5544 of 6711 relevant lines covered (82.61%)

4.13 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
93.75
 2.84% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFeatures.scala
1
95.38
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
61.73
 1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
67.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
86.67
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
98.86
 -0.39% adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala
1
59.46
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
2
93.02
 -2.33% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
89.32
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
64.94
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
4
81.49
 -0.42% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
5
64.29
 -35.71% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
7
89.16
 0.78% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
7
79.82
 -6.42% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
15
72.94
 0.21% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
16
88.97
 -0.84% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
26
83.73
 -3.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
53
55.19
 -4.71% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
64
81.69
 -9.82% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
84
69.59
 -4.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2200.1 266
82.6
2 2200.2 266
82.6
3 2200.3 266
82.61
4 2200.4 266
82.6
5 2200.5 266
82.61
Source Files on build 2200
Coverage ∆ File Lines Relevant Covered Missed Hits/Line