bigdatagenomics / adam / 2187
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 152
Run time 1min
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2187

Pull #1391

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/9f793f93e81babc77f863602b798e8b669fa0517">9f793f93e<a href="https://github.com/bigdatagenomics/adam/commit/9f793f93e81babc77f863602b798e8b669fa0517">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/d9b22cb638f0d634b328054104e6e9a69847c15d">d9b22cb63</a>">d9b22cb63</a><a href="https://github.com/bigdatagenomics/adam/commit/9f793f93e81babc77f863602b798e8b669fa0517"> into 8572fb7e8">8572fb7e8</a>
Pull Request #1391: [ADAM-1018] Add support for Spark SQL Datasets.

255 of 255 new or added lines in 12 files covered. (100.0%)

5589 of 6715 relevant lines covered (83.23%)

6.62 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
89.47
 1.01% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
2
87.5
 -2.5% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
2
89.19
 -1.29% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
4
69.46
 -4.24% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
4
72.94
 -0.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
4
84.21
 -1.24% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
4
88.69
 -1.04% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
11
83.1
 -6.28% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
21
81.44
 -3.93% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
87.5
 -6.25% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFeatures.scala
1
98.46
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
96.63
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
95.83
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
96.55
 -1.72% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
81.44
 -3.93% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
98.11
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
89.83
 -1.69% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
68.83
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
74.07
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
82.19
 0.14% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
84.4
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
60.49
 -3.7% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
4
71.43
 -28.57% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
7
88.69
 -1.04% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
11
69.46
 -4.24% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
14
90.34
 0.54% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
36
83.1
 -6.28% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
52
56.83
 -4.59% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
Jobs
ID Job ID Ran Files Coverage
1 2187.1 266
82.53
2 2187.2 266
82.53
3 2187.3 266
82.55
4 2187.4 266
82.55
5 2187.5 266
82.84
6 2187.6 266
82.86
7 2187.7 266
82.84
8 2187.8 266
82.86
Source Files on build 2187
Coverage ∆ File Lines Relevant Covered Missed Hits/Line