bigdatagenomics / adam / 2803

DEFAULT BRANCH: master
Ran
Jobs 8
Files 152
Run time 1min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
2803

push

jenkins

heuermh 
[ADAM-1539] Support region predicate in TransformAlignments.

Resolves #1539.

21 of 21 new or added lines in 3 files covered. (100.0%)

5496 of 6530 relevant lines covered (84.17%)

6.69 hits per line

Uncovered Changes

Lines Coverage ∆ File
2
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala

Coverage Regressions

Lines Coverage ∆ File
13
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
Jobs
ID Job ID Ran Files Coverage
1 2803.1 0
83.61
2 2803.2 0
83.61
3 2803.3 0
83.63
4 2803.4 0
83.63
5 2803.5 0
83.52
6 2803.6 0
83.52
7 2803.7 0
83.51
8 2803.8 0
83.51
Source Files on build 2803
Detailed source file information is not available for this build.