bigdatagenomics / adam / 2675

DEFAULT BRANCH: master
Ran
Jobs 8
Files 150
Run time 5min
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jenkins

heuermh 
[ADAM-1499] Enable reuse of broadcasted objects in region join. (#1524)

* [ADAM-1499] Enable reuse of broadcasted objects in region join.

Resolves #1499.

* Addressing reviewer comments.

* Addressing documentation comments.

37 of 37 new or added lines in 2 files covered. (100.0%)

5190 of 6329 relevant lines covered (82.0%)

6.55 hits per line

Uncovered Changes

Lines Coverage ∆ File
14
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/TreeRegionJoin.scala

Coverage Regressions

Lines Coverage ∆ File
7
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
5
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
Jobs
ID Job ID Ran Files Coverage
1 2675.1 0
81.96
2 2675.2 0
81.96
3 2675.3 0
81.94
4 2675.4 0
81.86
5 2675.5 0
81.94
6 2675.6 0
81.86
7 2675.7 0
81.88
8 2675.8 0
81.88
Source Files on build 2675
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