bigdatagenomics / adam / 2674

DEFAULT BRANCH: master
Ran
Jobs 8
Files 150
Run time 2min
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jenkins

heuermh 
[ADAM-1497] Add union to GenomicRDD.

Resolves #1497. Also adds `size` methods to `SequenceDictionary` and
`RecordGroupDictionary`. Requires the addition of a `ClassTag` to the
`GenericGenomicRDD` case class.

48 of 48 new or added lines in 11 files covered. (100.0%)

5183 of 6302 relevant lines covered (82.24%)

6.57 hits per line

Uncovered Changes

Lines Coverage ∆ File
6
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala

Coverage Regressions

Lines Coverage ∆ File
39
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
5
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
4
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
2
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/util/FileExtensions.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
Jobs
ID Job ID Ran Files Coverage
1 2674.1 0
82.13
2 2674.2 0
82.12
3 2674.3 0
82.15
4 2674.4 0
82.13
5 2674.5 0
82.12
6 2674.6 0
82.15
7 2674.7 0
82.16
8 2674.8 0
82.16
Source Files on build 2674
Detailed source file information is not available for this build.