4192
53%
master: 43%

Ran 18 May 2017 04:08PM UTC

Jobs 3

Files 287

Run time 1min

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Build # 4192

Build Type

push

travis-ci

Committed by

nathandunn

Commit Message

PR for generating FASTA sequence header with assemblage information (#1602)

* In getSequenceForFeatures, project feature JSON before sending it back to the client; move getSequenceForFeatures from SequenceService to RequestHandlingService

* Fix tests

* Add method to generate feature sequence FASTA header in the server

* Use the FASTA header provided by the server instead

* Move getSequenceForFeatures() method back to SequenceService

* Fix bug in FeatureProjectionService where the feature location JSON did not have the proper sequence information

* Make use of FeatureStringEnum in createJSONStringFromProjectionSequences()

Run Details

6777 of 12903 relevant lines covered (52.52%)

5275.61 hits per line

Uncovered Existing Lines

Lines	Coverage	File
34	100.0	/home/travis/build/GMOD/Apollo/grails-app/services/org/bbop/apollo/SequenceService.groovy
45	100.0	/home/travis/build/GMOD/Apollo/grails-app/services/org/bbop/apollo/FeatureProjectionService.groovy
57	100.0	/home/travis/build/GMOD/Apollo/grails-app/services/org/bbop/apollo/FastaHandlerService.groovy

Jobs

ID	Job ID	Ran	Coverage
1	4192.1 (DB=postgres)	18 May 2017 04:09PM UTC	52.51	Travis Job 4192.1
2	4192.2 (DB=mysql)	18 May 2017 04:08PM UTC	50.25	Travis Job 4192.2
3	4192.3 (DB=h2)	18 May 2017 04:09PM UTC	50.25	Travis Job 4192.3

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