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GMOD / Apollo / 4192
53%
master: 43%

Build:
Build:
LAST BUILD BRANCH: develop
DEFAULT BRANCH: master
Ran 18 May 2017 04:08PM UTC
Jobs 3
Files 287
Run time 1min
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nathandunn
PR for generating FASTA sequence header with assemblage information (#1602)

* In getSequenceForFeatures, project feature JSON before sending it back to the client; move getSequenceForFeatures from SequenceService to RequestHandlingService

* Fix tests

* Add method to generate feature sequence FASTA header in the server

* Use the FASTA header provided by the server instead

* Move getSequenceForFeatures() method back to SequenceService

* Fix bug in FeatureProjectionService where the feature location JSON did not have the proper sequence information

* Make use of FeatureStringEnum in createJSONStringFromProjectionSequences()

6777 of 12903 relevant lines covered (52.52%)

5275.61 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
34
100.0
/home/travis/build/GMOD/Apollo/grails-app/services/org/bbop/apollo/SequenceService.groovy
45
100.0
/home/travis/build/GMOD/Apollo/grails-app/services/org/bbop/apollo/FeatureProjectionService.groovy
57
100.0
/home/travis/build/GMOD/Apollo/grails-app/services/org/bbop/apollo/FastaHandlerService.groovy
Jobs
ID Job ID Ran Files Coverage
1 4192.1 (DB=postgres) 18 May 2017 04:09PM UTC 0
52.51
Travis Job 4192.1
2 4192.2 (DB=mysql) 18 May 2017 04:08PM UTC 0
50.25
Travis Job 4192.2
3 4192.3 (DB=h2) 18 May 2017 04:09PM UTC 0
50.25
Travis Job 4192.3
Source Files on build 4192
Detailed source file information is not available for this build.
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